Publications

    • A.Zadorin, Y. Rondelez, G. Gines, V. Dilhas, G. Urtel, A. Zambrano, J.-C. Galas, A. ́Estevez-Torres Synthesis and materialization of a reaction-diffusion French flag pattern Nature Chemistry 2017
    • G. Gines, A. Zadorin, JC. Galas, A. Estevez-Torres, T. Fujii Y. Rondelez. Microscopic Agents programmed by DNA circuits Nature Nanotechnology (2017)
    • K. Montagne, G. Gines, T. Fuji, Y. Rondelez Boosting functionality of synthetic DNA circuits with tailored deactivation, Nature Communication, 7, 13474 (2016)
    • A. Genot, A. Baccouche, R. Sieskind, N. Aubert-Kato, N. Bredeche, J.F. Bartolo, V. Taly, T. Fujii, Y. Rondelez High-resolution mapping of bifurcations in nonlinear DNA circuits Nature Chemistry 8, 760 (2016).
    • Perret, G., P. Ginet, M. C. Tarhan, A. Baccouche, T. Lacornerie, M. Kumemura, L. Jalabert et al. Nano systems and devices for applications in biology and nanotechnology Solid-State Electronics 115, 66-73 (2016). doi:10.1016/j.sse.2015.08.019
    • A. S. Zadorin, Y. Rondelez, J.-C. Galas, A. Estevez-Torres Synthesis of Programmable Reaction-Diffusion Fronts Using DNA Catalyzers, Phys. Rev. Lett, 114, 068301 (2015).
    • A. Zambrano, A. Zadorin, Y. Rondelez, A. Estévez-Torres, J-C. Galas, Pursuit-and-evasion Reaction-diffusion Waves In Micro-reactors with Tailored Geometry Journal of Physical Chemistry B 10.1021/jp509474w 119.17 5349-5355 (2015)
    • H. van Roekel, L. Meijer ; S. Masroor, G. Zandra, A. Estévez-Torres, Y. Rondelez, A. Zagaris, M. Peletier, P. Hilbers, T. de Greef Automated Design of Programmable Enzyme-Driven DNA Circuits. ACS Synthetic Biology, DOI : 10.1021/sb500300d (2014)
    • A. Baccouche, K. Montagne, A. Padirac, T. Fujii, Y. Rondelez, Dynamic DNA reaction network : a walkthrough, Methods 10.1016/j.ymeth.2014.01.015 (2014).
    • N. Aubert, T. Fujii, M. Hagiya, Y. Rondelez Computer Assisted Design for Scaling Up Systems based on DNA Reaction Networks, J. R. Soc. Interface, 11 20131167 (2014).
    • D. Q. Huy, N. Aubert, N. Noman, T. Fujii, Y. Rondelez, H. Iba, An Effective Method for Evolving Reaction Network in Synthetic Biochemical Systems, IEEE
      Transaction on Evolutionary Computations, (2014).
    • K. Hasatani, M. Leocmach, A. J. Genot, A. Estevez-Torres, T. Fujii, Y. Rondelez, High-throughput observation of compartmentalized biochemical oscillators, Chem. Commun., 49 (73), 8090 (2013)
    • N. Aubert, Y. Rondelez, T. Fujii, M. Hagiya, Enforcing delays in DNA computing systems, Natural Computing, 13(4), 559-572 (2014).
    • A. Padirac, T. Fujii, A. Estévez-Torres, Y. Rondelez, Spatial waves in synthetic biochemical networks, J. Am. Chem. Soc., 135 (39), 14586–14592 (2013).
    • A Genot, T. Fujii & Y. Rondelez, Scaling down DNA circuits with competitive neural networks, J. R. Soc. Interface, 10, 20130212 (2013).
    • A. Genot, T. Fujii & Y. Rondelez, In vitro regulatory models for systems biology. Journal of Biotechnology Advances, http://dx.doi.org/10.1016/ j.biotechadv.2013.04.008 (2013).
    • T. Fujii & Y. Rondelez, Predator-prey molecular ecosystems. ACS nano, 7, 27-34 (2013)
    • N. Aubert, Q. H. Dinh, M. Hagiya, T. Fujii, H. Iba, N. Bredeche, Y. Rondelez Evolution of Cheating DNA-based Agents Playing the Game of Rock-Paper-Scissors. Advances in Artificial Life, vol. 12, 1143-1150 (2013).
    • A. Padirac, T. Fujii & Y. Rondelez. Nucleic acids for the rational design of reaction circuits. Curr. Op. Biotech. 24 1-6 (2012)
    • A. Padirac, T. Fujii & Y. Rondelez, Bottom-up construction of in vitro switchable memories. PNAS 109, E3212–E3220 (2012)
    • L. Desbois, A. Padirac, S. Kaneda, Y. Rondelez, D. Hober, D. Collard & T. Fujii, A microfluidic device for on-chip agarose microbeads generation with ultralow reagent consumption. Biomicrofluidics. 6, 044101 (2012) ;
    • A. Genot, T. Fujii & Y. Rondelez, Computing with Competition in Biochemical Networks. Phys. Rev. Lett. 109 208102 (2012)
    • A. Padirac, T. Fujii & Y. Rondelez, Quencher-free multiplexed monitoring of DNA reaction circuits. Nucleic Acid Research, 1-7 (2012)
    • Y. Rondelez, Competition for catalytic resources alters biological network dynamics. Phys. Rev. Lett. 108, 018102 (2012)

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Informations Pratiques

Directeur
Elie Raphaël
elie.raphael (arobase) espci.fr

Directeur adjoint :
Olivier Dauchot
olivier.dauchot (arobase) espci.fr

Gestionnaire ESPCI :
Stéphanie Ledoux
stephanie.ledoux (arobase) espci.fr

Gestionnaire CNRS :
Solange Rogue
solange.rogue (arobase) espci.fr

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